Content Comparison

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At the time of writing, the most up-to-date version installed on the cluster is 4.14.2. To load it, run

  module load r/4.24.2

To make R 4.4.2 .1 autoload on login (no longer works, ignore)

  module initadd r/4.24.2

Interactive R use with slurm

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To run an interactive R session with 24 126 cores using the "general" partition, you will want to do the following:

fisbatchsrun --ntasks=24N 1 -n 126 --nodespartition=1general --exclusivepty bash

You can lower the amount of cores if the job is waiting a long time to assign a node.

Once you are in an interactive session, you can load one of the R modules and start working with it interactively.

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To list available versions of R, type

module srun -N 1 -n 128 -p general --constraint='epyc128' --pty bashavail r

At the time of writing, the most up-to-date version installed on the cluster is 4.14.2. To load it, run

  module purge
  module load r/4.24.2
  R
... # here will be the interactive commands with R
exit

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