...
Read R's built-in "parallel" package documentation for tips on parallel programming in R: https://stat.ethz.ch/R-manual/R-devel/library/parallel/doc/parallel.pdf
RGDAL R package
The GDAL library is available as a global HPC module. The GDAL versions installed on HPC are through the SPACK package manager suite.
More information about the SPACK package manager is located here:
The RGDAL package is available in the global R module version on HPC, but to call/load rgdal successfully the following lines would need to be entered before calling R and loading the rgdal library.
| Code Block | ||
|---|---|---|
| ||
module load gdal/3.6.1 r/4.2.2
source /gpfs/sharedfs1/admin/hpc2.0/apps/gdal/3.6.1/spack/share/spack/setup-env.sh
spack load gdal
|
RCurl with sftp functionality
...